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Nachiket Marathe

IMG 20180216 163615%20%281%29
Forsker
Telefon: 90739476

Curriculum Vitae

  • Marathe NP, Berglund F, Razavi M, Pal C, Dröge J, Samant S, Kristiansson E, Larsson DJ: Sewage effluent from an Indian hospital harbors novel carbapenemases and integron-borne antibiotic resistance genes. Microbiome 2019, 7(1):97.
  • Berglund F, Österlund T, Boulund F, Marathe NP, Larsson DJ, Kristiansson E: Identification and reconstruction of novel antibiotic resistance genes from metagenomes. Microbiome 2019, 7(1):52.
  • Walujkar SA, Kumbhare SV, Marathe NP, Patangia DV, Lawate PS, Bharadwaj RS, Shouche YS: Molecular profiling of mucosal tissue associated microbiota in patients manifesting acute exacerbations and remission stage of ulcerative colitis. World Journal of Microbiology and Biotechnology 2018, 34(6):76.
  • Marathe NP, Janzon A, Kotsakis SD, Flach C-F, Razavi M, Berglund F, Kristiansson E, Larsson DJ: Functional metagenomics reveals a novel carbapenem-hydrolyzing mobile beta-lactamase from Indian river sediments contaminated with antibiotic production waste. Environment international 2018, 112:279-286.
  • Jutkina J, Marathe N, Flach C-F, Larsson D: Antibiotics and common antibacterial biocides stimulate horizontal transfer of resistance at low concentrations. Science of the total Environment 2018, 616:172-178.
  • Razavi M, Marathe NP, Gillings MR, Flach C-F, Kristiansson E, Larsson DJ: Discovery of the fourth mobile sulfonamide resistance gene. Microbiome 2017, 5(1):160.
  • Marathe NP, Pal C, Gaikwad SS, Jonsson V, Kristiansson E, Larsson DJ: Untreated urban waste contaminates Indian river sediments with resistance genes to last resort antibiotics. Water research 2017, 124:388-397.
  • Boulund F, Berglund F, Flach C-F, Bengtsson-Palme J, Marathe NP, Larsson DJ, Kristiansson E: Computational discovery and functional validation of novel fluoroquinolone resistance genes in public metagenomic data sets. BMC genomics 2017, 18(1):682.
  • Berglund F, Marathe NP, Österlund T, Bengtsson-Palme J, Kotsakis S, Flach C-F, Larsson DJ, Kristiansson E: Identification of 76 novel B1 metallo-β-lactamases through large-scale screening of genomic and metagenomic data. Microbiome 2017, 5(1):134.
  • Paul D, Kumbhare SV, Mhatre SS, Chowdhury SP, Shetty SA, Marathe NP, Bhute S, Shouche YS: Exploration of microbial diversity and community structure of lonar lake: the only hypersaline meteorite crater lake within basalt rock. Frontiers in microbiology 2016, 6:1553.
  • Marathe NP, Shetty SA, Shouche YS, Larsson DJ: Limited bacterial diversity within a treatment plant receiving antibiotic-containing waste from bulk drug production. PloS one 2016, 11(11):e0165914.
  • Marathe NP, Gaikwad SS, Vaishampayan AA, Rasane MH, Shouche YS, Gade WN: Mossambicus tilapia (Oreochromis mossambicus) collected from water bodies impacted by urban waste carries extended-spectrum beta-lactamases and integron-bearing gut bacteria. Journal of biosciences 2016, 41(3):341-346.
  • Pandey PK, Verma P, Marathe N, Shetty S, Bavdekar A, Patole MS, Stensvold CR, Shouche YS: Prevalence and subtype analysis of Blastocystis in healthy Indian individuals. Infection, Genetics and Evolution 2015, 31:296-299.
  • Marathe N, Nagarkar S, Vaishampayan A, Rasane M, Samant S, Dohe V, Kagal A, Shouche Y, Deshpande N: High prevalence of class 1 integrons in clinical isolates of methicillin-resistant Staphylococcus aureus from India. Indian journal of medical microbiology 2015, 33(2):231.
  • Lanjekar VB, Marathe NP, Shouche YS, Ranade DR: Clostridium punense sp. nov., an obligate anaerobe isolated from healthy human faeces. International journal of systematic and evolutionary microbiology 2015, 65(12):4749-4756.
  • Johnning A, Kristiansson E, Angelin M, Marathe N, Shouche YS, Johansson A, Larsson DJ: Quinolone resistance mutations in the faecal microbiota of Swedish travellers to India. BMC microbiology 2015, 15(1):235.
  • Walujkar SA, Dhotre DP, Marathe NP, Lawate PS, Bharadwaj RS, Shouche YS: Characterization of bacterial community shift in human Ulcerative Colitis patients revealed by Illumina based 16S rRNA gene amplicon sequencing. Gut pathogens 2014, 6(1):22.
  • Rutgersson C, Fick J, Marathe N, Kristiansson E, Janzon A, Angelin M, Johansson A, Shouche Y, Flach C-F, Larsson DJ: Fluoroquinolones and qnr genes in sediment, water, soil, and human fecal flora in an environment polluted by manufacturing discharges. Environmental science & technology 2014, 48(14):7825-7832.
  • Marathe NP, Shetty SA, Lanjekar VB, Rasane MH, Ranade DR, Shouche YS: Genome sequencing of multidrug resistant novel Clostridium sp. BL8 reveals its potential for pathogenicity. Gut pathogens 2014, 6(1):30.
  • Mahale KN, Paranjape PS, Marathe NP, Dhotre DP, Chowdhury S, Shetty SA, Sharma A, Sharma K, Tuteja U, Batra HV: Draft genome sequences of Yersinia pestis strains from the 1994 plague epidemic of Surat and 2002 Shimla outbreak in India. Indian journal of microbiology 2014, 54(4):480-482.
  • Lanjekar V, Marathe N, Ramana VV, Shouche Y, Ranade D: Megasphaera indica sp. nov., an obligate anaerobic bacteria isolated from human faeces. International journal of systematic and evolutionary microbiology 2014, 64(7):2250-2256.
  • Shetty SA, Marathe NP, Shouche YS: Initiating exploration of the gut microbiome in Indians. Current Science 2013, 104(5):580.
  • Shetty SA, Marathe NP, Shouche YS: Opportunities and challenges for gut microbiome studies in the Indian population. Microbiome 2013, 1(1):24.
  • Shetty SA, Marathe NP, Munot H, Antony CP, Dhotre DP, Murrell JC, Shouche YS: Draft genome sequence of Methylophaga lonarensis MPLT, a haloalkaliphilic (non-methane-utilizing) methylotroph. Genome Announc 2013, 1(3):e00202-00213.
  • Shetty SA, Marathe NP, Lanjekar V, Ranade D, Shouche YS: Comparative genome analysis of Megasphaera sp. reveals niche specialization and its potential role in the human gut. PloS one 2013, 8(11):e79353.
  • Marathe NP, Regina VR, Walujkar SA, Charan SS, Moore ER, Larsson DJ, Shouche YS: A treatment plant receiving waste water from multiple bulk drug manufacturers is a reservoir for highly multi-drug resistant integron-bearing bacteria. PLoS One 2013, 8(10):e77310.
  • Marathe NP, Rasane MH, Kumar H, Patwardhan AA, Shouche YS, Diwanay SS: In vitro antibacterial activity of Tabernaemontana alternifolia (Roxb) stem bark aqueous extracts against clinical isolates of methicillin resistant Staphylococcus aureus. Annals of clinical microbiology and antimicrobials 2013, 12(1):26.
  • Marathe N, Shetty S, Lanjekar V, Ranade D, Shouche Y: Changes in human gut flora with age: an Indian familial study. BMC microbiology 2012, 12(1):222.

Publikasjoner

Populærvitenskapelige artikler

2019

Sewage effluent from an Indian hospital harbors novel carbapenemases and integron-borne antibiotic resistance genes

Nachiket Marathe, Fanny Berglund, Mahammad Razavi, Chandan Pal, Johannes Dröge, Sharvari Samant, Erik Kristiansson, DG Joakim Larsson
Microbiome 7

Vitenskapelige artikler (NVI)

2021

Draft Genome Sequence of Multidrug-Resistant Pseudomonas protegens Strain 11HC2, Isolated from Marine Plastic Collected from the West Coast of Norway

Vera Radisic, Bjørn Tore Lunestad, Monica Sanden, Michael Bank, Nachiket Marathe
Microbiology Resource Announcements (MRA)
2021

Draft Genome Sequence of Multidrug-Resistant Pseudomonas protegens Strain 11HC2, Isolated from Marine Plastic Collected from the West Coast of Norway

Vera Radisic, Bjørn Tore Lunestad, Monica Sanden, Michael S Bank, Nachiket P Marathe
Microbiology Resource Announcements 10(2) (Ja)
2020

Structural and biochemical characterization of the environmental MBLs MYO-1, ECV-1 and SHD-1

Christopher Frøhlich, Vidar Sørum, Sandra Huber, Ørjan Samuelsen, Fanny Berglund, Erik Kristiansson, Stathis D. Kotsakis, Nachiket Marathe, DG Joakim Larsson, Hanna-Kirsti Schrøder Leiros
Journal of Antimicrobial Chemotherapy 75 p. 2554-2563
2020

Vibrios from the Norwegian marine environment: Characterization of associated antibiotic resistance and virulence genes

Fredrik Håkonsholm, Bjørn Tore Lunestad, Jose Roberto Aguirre Sanchez, Jaime Martinez-Urtaza, Nachiket Marathe, Cecilie Smith Svanevik
MicrobiologyOpen 9
2020

Structural and biochemical characterization of the environmental MBLs MYO-1, ECV-1 and SHD-1

Christopher Fröhlich, Vidar Sørum, Sandra Huber, Ørjan Samuelsen, Fanny Berglund, Erik Kristiansson, Stathis D Kotsakis, Nachiket P Marathe, DG Joakim Larsson, Hanna-Kirsti S Leiros
Journal of Antimicrobial Chemotherapy 75 (9) (Ja) p. 2554-2563
2020

Nanopore sequencing reveals genomic map of CTX-M-type extended-spectrum β-lactamases carried by Escherichia coli strains isolated from blue mussels (Mytilus edulis) in Norway

Didrik H Grevskott, Francisco Salvà-Serra, Edward RB Moore, Nachiket P Marathe
BMC Microbiology 20 (Ja) p. 134
2020

Discovery of a novel integron-borne aminoglycoside resistance gene present in clinical pathogens by screening environmental bacterial communities

Maria-Elisabeth Böhm, Mohammad Razavi, Nachiket Marathe, Carl-Fredrik Flach, D. G. Joakim Larsson
Microbiome 8 p. 1-11
2020

Antibiotic sensitivity screening of Klebsiella spp. and Raoultella spp. isolated from marine bivalve molluscs reveal presence of CTX-M-producing K. pneumoniae

Fredrik Håkonsholm, Marit Andrea Klokkhammer Hetland, Cecilie Smith Svanevik, Arnfinn Sundsfjord, Bjørn Tore Lunestad, Nachiket Marathe
Microorganisms 8:1909 p. 1-15
2020

Marine plastics from Norwegian west coast carry potentially virulent fish pathogens and opportunistic human pathogens harboring new variants of antibiotic resistance genes

Vera Radisic, Priyank Sharad Nimje, André Marcel Bienfait, Nachiket Marathe
Microorganisms 8:1200 p. 1-13
2019

Scandinavium goeteborgense gen. nov., sp. nov., a New Member of the Family Enterobacteriaceae Isolated From a Wound Infection, Carries a Novel Quinolone Resistance Gene Variant

Nachiket Marathe, Francisco Salvà-Serra, Roger Karlsson, DG Joakim Larsson, Edward RB Moore, Liselott Svensson-Stadler, Hedvig E. Jakobsson
Frontiers in Microbiology 10
2019

Identification and reconstruction of novel antibiotic resistance genes from metagenomes

Fanny Berglund, Tobias Osterlund, Fredrik Boulund, Nachiket Marathe, D.G. Joakim Larsson, Erik Kristiansson
Microbiome 7 p. 1-14
2018

Antibiotics and common antibacterial biocides stimulate horizontal transfer of resistance at low concentrations

Jutkina J, Marathe NP, Flach C-F, Larsson DGJ
Science of the total Environment 5
2018

Functional metagenomics reveals a novel carbapenem-hydrolyzing mobile beta-lactamase from Indian river sediments contaminated with antibiotic production waste

Marathe NP, Janzon A, Kotsakis SD, Flach C-F, Razavi M, Berglund F, Kristiansson E, Larsson DGJ
Environment international 112
2018

Molecular profiling of mucosal tissue associated microbiota in patients manifesting acute exacerbations and remission stage of ulcerative colitis

Walujkar SA, Kumbhare SV, Marathe NP, Patangia DV, Lawate PS, Bharadwaj RS, Shouche YS
World Journal of Microbiology and Biotechnology 34
2017

Identification of 76 novel B1 metallo-β-lactamases through large-scale screening of genomic and metagenomic data

Berglund F, Marathe NP, Österlund T, Bengtsson-Palme J, Kotsakis S, Flach C-F, Larsson DGJ, Kristiansson E
Microbiome 5
2017

Computational discovery and functional validation of novel fluoroquinolone resistance genes in public metagenomic data sets

Boulund F, Berglund F, Flach C-F, Bengtsson-Palme J, Marathe NP, Larsson DGJ, Kristiansson E
BMC Genomics 18
2017

Untreated urban waste contaminates Indian river sediments with resistance genes to last resort antibiotics

Marathe NP, Pal C, Gaikwad SS, Jonsson V, Kristiansson E, Larsson DGJ
Water Research 124
2017

Discovery of the fourth mobile sulfonamide resistance gene

Razavi M, Marathe NP, Gillings MR, Flach C-F, Kristiansson E, Larsson DGJ
Microbiome 5
2016

Mossambicus tilapia (Oreochromis mossambicus) collected from water bodies impacted by urban waste carries extended-spectrum beta-lactamases and integron-bearing gut bacteria

Nachiket P Marathe, Swapnil S Gaikwad, Ankita A Vaishampayan, Mandar H Rasane, Yogesh S Shouche, Wasudev N Gade
Journal of biosciences 41(3) (Ja) p. 341-346
2016

Limited bacterial diversity within a treatment plant receiving antibiotic-containing waste from bulk drug production

Nachiket P Marathe, Sudarshan A Shetty, Yogesh S Shouche, DG Joakim Larsson
PLoS One e0165914 (Ja)

Rapporter og avhandlinger

2020

Monitoring programme for veterinary control on seafood products imported to Norway from third countries – Results from 2019: In accordance with Commission Regulation (EC) No 136/2004, Annex II, Part 1

Helge Torbjørn Hove, Julia Endresen Storesund, Bjørn Tore Lunestad, Nachiket Marathe, Martin Wiech

Faglige foredrag

2019

New monsters from the sea? The emerging risk from human pathogenic Vibrios

Fredrik Håkonsholm, Bjørn Tore Lunestad, Julia Endresen Storesund, Nachiket Marathe, Cecilie Smith Svanevik
2019

Klebsiella update from the Institute of Marine Research

Cecilie Smith Svanevik, Fredrik Håkonsholm, Julia Endresen Storesund, Bjørn Tore Lunestad, Nachiket Marathe
2019

Characterisation of Vibrio spp. from Norway

Cecilie Smith Svanevik, Fredrik Håkonsholm, Julia Endresen Storesund, Nachiket Marathe, Bjørn Tore Lunestad
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